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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015806405.1_cds_XP_016494330.1_8754
CDS Infomation

[gene=LOC107813561] [db_xref=GeneID:107813561] [protein=beta-amylase 3, chloroplastic-like] [protein_id=XP_016494330.1] [location=join(57019..57554,58503..58713,59550..59660,60372..61160)] [gbkey=CDS]
Sequence

ATGTCTTTAACACTTCATTCTTCAACTTCTTTTATCAATAAAAAAGAAACAAAAAATTCA
AGACATCATGATGATATCTCAAACATGACTTGCTTTGCTCAAATCAAGCCATCATTCCAT
CTCAAAGCAAAGAATTCCAAAGAAATTCAATTCTTTGCTCCTAATATGGAAGGAAGAAAT
ATAAACAATGAAGAAGAAGGAGAGAAACTTCATGTACTAACAACTAGTACTCATAGCAAT
AATAGTAGTACCACAAAGGTACCAGTTTTTGTGATGTTACCACTTGATACTATAAATATT
GGAGGGAACTTGAACAAGCCGAGAGCGATGAATGCTAGTTTAATGGCATTAAAAAGTGCT
GGAGTTGAAGGAGTAATGGTGGATTGTTGGTGGGGTTTAGTTGAAAAAGATGGACCTTTG
AAATATAATTGGGATGGATATTATGAACTTGTAAAAATGGTTCAAGAACATGGTTTGAAG
CTTCAAGTTGTCATGTCTTTTCATCAATGTGGTGGCAATGTTGGAGACTCTTGCAGTATC
CCTCTACCTCCATGGGTACTTGAAGAAATCAGCAAAAATCCTGATCTTGTTTACACAGAC
AGATCAGGCAGGAGAAATCCTGAGTACATTTCCTTAGGTTGTGATTTATTACCTGTAATC
AGAGGAAGAACACCAATTCAAGTATACACTGAATTTATGAGAAGTTTCAGAGAAAGATTC
AAGAATTATTTGGGAGATGTTATAGTGGAAATACAAGTGGGAATGGGTCCTTGTGGGGAA
CTGAGATATCCATCTTATCCAGAAAGCAATGGTACTTGGAGATTTCCTGGAATTGGAGAA
TTTCAGTGCTATGACAAGTACATGAAAGCTTCACTAGCAGCAGCTGCAGAAGCAAAGGGA
AAGAATGACTGGGGCCGGGGCGGGCCCCACGATTCGGGACAATACAATCAGTTTCCAGAG
GACACTGGATTTTTCAAAAGGGATGGAACATGGAACAATGAATATGGACAGTTTTTCCTA
GAATGGTATTCAGGGAAATTATTGGAACACGGCGATAGAATCCTAGGATCAGCAGAAGGT
ATATTTAGAGGAACTGGAGCTAAATTATCAGGAAAAGTAGCTGGAATTCATTGGCATTAT
AACACAAGATCACATGCAGCAGAATTAACAGCAGGATACTATAATACAAGGCATAGAGAT
GGTTATCTACCTATAGCACGTATGTTCGCGAAACATGGTGTCGTGTTTAACTTTACCTGT
ATGGAAATGAGAGATGGCGAACAGCCACAGAGTGCAAATTGCTCGCCAGAAGGTTTGGTT
CGACAAGTGAAAAAGGCGACTCAAATTGCTGGAATTGAACTAGCCGGAGAAAACGCGCTG
GAAAGGTATGATGGAGGAGGATATGCACAAGTTTTGGCAACAAGTAAATCAGAGTCTGGA
AATGGATTGAGTGCATTTACTTACTTGAGATTGAACAAACGGTTATTCGAACCAGAGAAT
TGGCGAAATCTCGTTGAATTTGTGAAGAACATGTCTGAAGGAGGTAAAACAAGACTTCCA
GAATGTGACACAAGCAGGACAGACCTATATGTTGGATTTGTCAAAGAGAGTCATGCCAAA
AAAACTGCAGACGCTGTAGTTGTGTAA

Peptide Sequence

PEP ID

XP_016494330.1
PEP Infomation

PREDICTED: beta-amylase 3, chloroplastic-like [Nicotiana tabacum]
Sequence

MSLTLHSSTSFINKKETKNSRHHDDISNMTCFAQIKPSFHLKAKNSKEIQFFAPNMEGRN
INNEEEGEKLHVLTTSTHSNNSSTTKVPVFVMLPLDTINIGGNLNKPRAMNASLMALKSA
GVEGVMVDCWWGLVEKDGPLKYNWDGYYELVKMVQEHGLKLQVVMSFHQCGGNVGDSCSI
PLPPWVLEEISKNPDLVYTDRSGRRNPEYISLGCDLLPVIRGRTPIQVYTEFMRSFRERF
KNYLGDVIVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMKASLAAAAEAKG
KNDWGRGGPHDSGQYNQFPEDTGFFKRDGTWNNEYGQFFLEWYSGKLLEHGDRILGSAEG
IFRGTGAKLSGKVAGIHWHYNTRSHAAELTAGYYNTRHRDGYLPIARMFAKHGVVFNFTC
MEMRDGEQPQSANCSPEGLVRQVKKATQIAGIELAGENALERYDGGGYAQVLATSKSESG
NGLSAFTYLRLNKRLFEPENWRNLVEFVKNMSEGGKTRLPECDTSRTDLYVGFVKESHAK
KTADAVVV

Transcript Sequence

Gene sequence data has not been registered.